plot_model
plot_model(demo, raster, timestep, cmap='viridis', legend=True, tiles='CartoDB positron')
Plots the demes and migration rates for a given timestep as an interactive map.
Parameters
| Name | Type | Description | Default |
|---|---|---|---|
demo |
spaceprime.spDemography | The demographic model to plot. | required |
raster |
rasterio.DatasetReader | The raster dataset used to create the demes matrix(es). | required |
timestep |
int | The index of the desired timestep to plot. | required |
cmap |
str | The colormap to use for the deme sizes. Defaults to ‘viridis’. | 'viridis' |
legend |
bool | Whether to show the color legend. Defaults to True. | True |
tiles |
str | The basemap tiles to use. Defaults to “CartoDB positron”. | 'CartoDB positron' |
Returns
| Type | Description |
|---|---|
| folium.folium.Map | An interactive plot of the demes and migration rates. |
Example
raster = rasterio.open(“path/to/raster.tif”) # Plot the model at timestep 1 plot_model(demo, raster, 1)
Notes
Since this function returns a folium map object, you can further modify the map or save it to an HTML file with the folium library.